Phosducin-like

Protein-coding gene in humans
PDCL
Identifiers
AliasesPDCL, PhLP, Phosducin-like, phosducin like
External IDsOMIM: 604421; MGI: 1914716; HomoloGene: 38043; GeneCards: PDCL; OMA:PDCL - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for PDCL
Genomic location for PDCL
Band9q33.2Start122,798,389 bp[1]
End122,828,588 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for PDCL
Genomic location for PDCL
Band2|2 BStart37,240,086 bp[2]
End37,249,344 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • endothelial cell

  • visceral pleura

  • oocyte

  • parietal pleura

  • tibia

  • Achilles tendon

  • secondary oocyte

  • germinal epithelium

  • epithelium of nasopharynx
Top expressed in
  • pineal gland

  • cumulus cell

  • neural layer of retina

  • medial ganglionic eminence

  • stria vascularis

  • carotid body

  • superior cervical ganglion

  • vestibular sensory epithelium

  • mandibular prominence

  • maxillary prominence
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • protein binding
  • queuine tRNA-ribosyltransferase activity
  • protein-containing complex binding
Cellular component
  • cytoplasm
  • cytosol
  • cilium
  • cell projection
Biological process
  • queuosine biosynthetic process
  • heterotrimeric G-protein complex assembly
  • regulation of G protein-coupled receptor signaling pathway
  • negative regulation of protein refolding
  • signal transduction
  • visual perception
  • response to stimulus
  • protein folding
  • positive regulation of smoothened signaling pathway
  • cell projection organization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5082

67466

Ensembl

ENSG00000136940

ENSMUSG00000009030

UniProt

Q13371

Q9DBX2

RefSeq (mRNA)

NM_005388

NM_026176

RefSeq (protein)

NP_005379

NP_080452

Location (UCSC)Chr 9: 122.8 – 122.83 MbChr 2: 37.24 – 37.25 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Phosducin-like protein is a protein that in humans is encoded by the PDCL gene.[5][6]

Phosducin-like protein is a putative modulator of heterotrimeric G proteins. The protein shares extensive amino acid sequence homology with phosducin, a phosphoprotein expressed in the retina and pineal gland. Both phosducin-like protein and phosphoducin have been shown to regulate G-protein signaling by binding to the beta-gamma subunits of G proteins.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000136940 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000009030 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Thibault C, Feng Wang J, Charnas R, Mirel D, Barhite S, Miles MF (May 1999). "Cloning and characterization of the rat and human phosducin-like protein genes: structure, expression and chromosomal localization". Biochim Biophys Acta. 1444 (3): 346–54. doi:10.1016/S0167-4781(99)00006-8. PMID 10095058.
  6. ^ a b "Entrez Gene: PDCL phosducin-like".

Further reading

  • Miles MF, Barhite S, Sganga M, Elliott M (1993). "Phosducin-like protein: an ethanol-responsive potential modulator of guanine nucleotide-binding protein function". Proc. Natl. Acad. Sci. U.S.A. 90 (22): 10831–5. Bibcode:1993PNAS...9010831M. doi:10.1073/pnas.90.22.10831. PMC 47872. PMID 8248177.
  • Lazarov ME, Martin MM, Willardson BM, Elton TS (1999). "Human phosducin-like protein (hPhLP) messenger RNA stability is regulated by cis-acting instability elements present in the 3'-untranslated region". Biochim. Biophys. Acta. 1446 (3): 253–64. doi:10.1016/S0167-4781(99)00098-6. PMID 10524200.
  • Ruiz-Gómez A, Humrich J, Murga C, et al. (2000). "Phosphorylation of phosducin and phosducin-like protein by G protein-coupled receptor kinase 2". J. Biol. Chem. 275 (38): 29724–30. doi:10.1074/jbc.M001864200. PMID 10884381.
  • Lazarov ME, Martin MM, Willardson BM, Elton TS (2000). "Molecular cloning and characterization of the human phosducin-like protein (hPhLP) promoter". Biochim. Biophys. Acta. 1492 (2–3): 460–4. doi:10.1016/S0167-4781(00)00137-8. PMID 10899582.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • McLaughlin JN, Thulin CD, Hart SJ, et al. (2002). "Regulatory interaction of phosducin-like protein with the cytosolic chaperonin complex". Proc. Natl. Acad. Sci. U.S.A. 99 (12): 7962–7. Bibcode:2002PNAS...99.7962M. doi:10.1073/pnas.112075699. PMC 123003. PMID 12060742.
  • Humrich J, Bermel C, Grubel T, et al. (2003). "Regulation of phosducin-like protein by casein kinase 2 and N-terminal splicing". J. Biol. Chem. 278 (7): 4474–81. doi:10.1074/jbc.M206347200. PMID 12466282.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Carter MD, Southwick K, Lukov G, et al. (2005). "Identification of phosphorylation sites on phosducin-like protein by QTOF mass spectrometry". J Biomol Tech. 15 (4): 257–64. PMC 2291704. PMID 15585822.
  • Humrich J, Bermel C, Bünemann M, et al. (2005). "Phosducin-like protein regulates G-protein betagamma folding by interaction with tailless complex polypeptide-1alpha: dephosphorylation or splicing of PhLP turns the switch toward regulation of Gbetagamma folding". J. Biol. Chem. 280 (20): 20042–50. doi:10.1074/jbc.M409233200. PMID 15745879.
  • Lukov GL, Hu T, McLaughlin JN, et al. (2005). "Phosducin-like protein acts as a molecular chaperone for G protein betagamma dimer assembly". EMBO J. 24 (11): 1965–75. doi:10.1038/sj.emboj.7600673. PMC 1142607. PMID 15889144.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • Lukov GL, Baker CM, Ludtke PJ, et al. (2006). "Mechanism of assembly of G protein betagamma subunits by protein kinase CK2-phosphorylated phosducin-like protein and the cytosolic chaperonin complex". J. Biol. Chem. 281 (31): 22261–74. doi:10.1074/jbc.M601590200. PMID 16717095.
  • Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.
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