Protein-coding gene in the species Homo sapiens
GSDMB |
---|
|
Identifiers |
---|
Aliases | GSDMB, GSDML, PRO2521, PP4052, gasdermin B, GSDMB-1 |
---|
External IDs | OMIM: 611221; HomoloGene: 88856; GeneCards: GSDMB; OMA:GSDMB - orthologs |
---|
Gene location (Human) |
---|
| Chr. | Chromosome 17 (human)[1] |
---|
| Band | 17q21.1 | Start | 39,904,595 bp[1] |
---|
End | 39,919,854 bp[1] |
---|
|
RNA expression pattern |
---|
Bgee | Human | Mouse (ortholog) |
---|
Top expressed in | - rectum
- right lobe of liver
- mucosa of transverse colon
- granulocyte
- mucosa of ileum
- duodenum
- cerebellar hemisphere
- right hemisphere of cerebellum
- jejunal mucosa
- body of stomach
|
| | More reference expression data |
|
---|
BioGPS | |
---|
|
Gene ontology |
---|
Molecular function | - molecular function
- phosphatidylserine binding
- phosphatidylinositol-4,5-bisphosphate binding
- phosphatidylinositol-4-phosphate binding
| Cellular component | - cytoplasm
- cytosol
- plasma membrane
- membrane
- cellular component
| Biological process | - programmed cell death
- biological process
- pyroptosis
| Sources:Amigo / QuickGO |
|
Orthologs |
---|
Species | Human | Mouse |
---|
Entrez | | |
---|
Ensembl | | |
---|
UniProt | | |
---|
RefSeq (mRNA) | |
---|
NM_001042471 NM_001165958 NM_001165959 NM_018530 NM_001369402 |
| |
---|
RefSeq (protein) | |
---|
NP_001035936 NP_001159430 NP_001159431 NP_061000 NP_001356331 |
| |
---|
Location (UCSC) | Chr 17: 39.9 – 39.92 Mb | n/a |
---|
PubMed search | [2] | n/a |
---|
|
Wikidata |
|
Gasdermin B is a protein that in humans is encoded by the GSDMB gene. [3]
Function
This gene encodes a member of the gasdermin-domain containing protein family. Other gasdermin-family genes are implicated in the regulation of apoptosis in epithelial cells, and are linked to cancer. Multiple transcript variants encoding different isoforms have been found for this gene. Additional variants have been described, but they are candidates for nonsense-mediated mRNA decay (NMD) and are unlikely to be protein-coding.
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000073605 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Entrez Gene: Gasdermin B". Retrieved 2016-08-26.
Further reading
- Katoh M, Katoh M (2004). "Evolutionary recombination hotspot around GSDML-GSDM locus is closely linked to the oncogenomic recombination hotspot around the PPP1R1B-ERBB2-GRB7 amplicon". Int. J. Oncol. 24 (4): 757–63. doi:10.3892/ijo.24.4.757. PMID 15010812.
This article incorporates text from the United States National Library of Medicine, which is in the public domain.