GSDMB

Protein-coding gene in the species Homo sapiens
GSDMB
Identifiers
AliasesGSDMB, GSDML, PRO2521, PP4052, gasdermin B, GSDMB-1
External IDsOMIM: 611221; HomoloGene: 88856; GeneCards: GSDMB; OMA:GSDMB - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for GSDMB
Genomic location for GSDMB
Band17q21.1Start39,904,595 bp[1]
End39,919,854 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • rectum

  • right lobe of liver

  • mucosa of transverse colon

  • granulocyte

  • mucosa of ileum

  • duodenum

  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • jejunal mucosa

  • body of stomach
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • molecular function
  • phosphatidylserine binding
  • phosphatidylinositol-4,5-bisphosphate binding
  • phosphatidylinositol-4-phosphate binding
Cellular component
  • cytoplasm
  • cytosol
  • plasma membrane
  • membrane
  • cellular component
Biological process
  • programmed cell death
  • biological process
  • pyroptosis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

55876

n/a

Ensembl

ENSG00000073605

n/a

UniProt

Q8TAX9

n/a

RefSeq (mRNA)

NM_001042471
NM_001165958
NM_001165959
NM_018530
NM_001369402

n/a

RefSeq (protein)

NP_001035936
NP_001159430
NP_001159431
NP_061000
NP_001356331

n/a

Location (UCSC)Chr 17: 39.9 – 39.92 Mbn/a
PubMed search[2]n/a
Wikidata
View/Edit Human

Gasdermin B is a protein that in humans is encoded by the GSDMB gene. [3]

Function

This gene encodes a member of the gasdermin-domain containing protein family. Other gasdermin-family genes are implicated in the regulation of apoptosis in epithelial cells, and are linked to cancer. Multiple transcript variants encoding different isoforms have been found for this gene. Additional variants have been described, but they are candidates for nonsense-mediated mRNA decay (NMD) and are unlikely to be protein-coding.

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000073605 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Entrez Gene: Gasdermin B". Retrieved 2016-08-26.

Further reading

  • Katoh M, Katoh M (2004). "Evolutionary recombination hotspot around GSDML-GSDM locus is closely linked to the oncogenomic recombination hotspot around the PPP1R1B-ERBB2-GRB7 amplicon". Int. J. Oncol. 24 (4): 757–63. doi:10.3892/ijo.24.4.757. PMID 15010812.


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This article incorporates text from the United States National Library of Medicine, which is in the public domain.